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Great post! I guess what we're hoping for is for people to list programs with obvious or not-so-obvious deficits to help us in making decisions about where to apply, where to interview (if conflicts occur), and ultimately where to rank. Sometimes it's really hard to get a feel for the bad aspects of a program without rotating there, even if you talk to residents during the interview day. Even when you do rotate at a program, you may not pick up on the less obvious negatives.
One person's positive is another person's negative. Since a lot of people can't/won't apply to every program in the country, when choosing where to apply, you should look for: (a non-exhaustive list)
1) Size
The "feel" of a small (e.g. 1-2 per year) versus a large (e.g. 5+ per year) is different. You may be the kind of person who likes a large program and the opportunity to work with more specialized faculty and have more research support at your disposal. Or you may like a small program, and close-knit environment and relationships between the residents and the faculty.
2) Inpatient vs. Outpatient
Look at how much time you spend on inpatient consults. Maybe you're the kind of person who likes this, or maybe you'd rather spend all of your time in clinic.
3) Didactics
Some programs take a "learn as you go" approach, which rewards self-motivation and learning by doing. Others schedule traditional lecture time (+/- homework) which you may like. Derm is a lot of material to absorb, after all.
4) New vs. Old
An established program has the advantage of experienced faculty who may be leaders in their field. New programs have new faculty, working to make a name for themselves and who may have been residents themselves recently.
5) Location
City size, weather, and local culture are all personal decisions, and apply just as well to dermatology as to other specialities.
Others, feel free to add to this list.